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| PUBLICATIONS 2007 | home > faculty & research > recent publications > publications | |||
2007 • Arakaki T, Neely H, Boni E, Mueller N, Buckner FS, Van Voorhis WC, Lauricella A, DeTitta G, Luft J, Hol WG, Merritt EA. The structure of Plasmodium vivax phosphatidylethanolamine-binding protein suggests a functional motif containing a left-handed helix. Acta Crystallograph Sect F Struct Biol Cryst Commun. 2007 Mar 1;63(Pt 3):178-82. [PubMed] • Brucz K, Miknis ZJ, Schultz LW, Umland TC. Expression, purification and characterization of recombinant severe acute respiratory syndrome coronavirus non-structural protein 1. Protein Expr Purif. 2007 Apr;52(2):249-57. [PubMed] • Cody V, Davis PJ, Davis FB. Molecular modeling of the thyroid hormone interactions with alpha v beta 3 integrin. Steroids. 2007 Feb;72(2):165-70. [PubMed] • Cody, V., Duax, W.L. and Huether, R., Genome-Wide Sequence Homology Analysis of Prokaryote and Eukaryote Dihydrofolate Reductase: Covariance Correlations of Ring-Ring Stacking Interactions, Congress Proceedings of the 13th International Symposium on Chemistry and Biology of Pteridines and Folates, Peters, G.J. and Jansen, G. (eds), SPS Publishers, Amsterdam, pp 119-126 (2007). • Deng X, Habel JE, Kabaleeswaran V, Snell EH, Wold MS, Borgstahl GE. Structure of the full-length human RPA14/32 complex gives insights into the mechanism of DNA binding and complex formation. J Mol Biol. 2007 Dec 7;374(4):865-76. [PubMed] • Dollins DE, Warren JJ, Immormino RM, Gewirth DT. Structures of GRP94-nucleotide complexes reveal mechanistic differences between the hsp90 chaperones. Mol Cell. 2007 Oct 12;28(1):41-56. [PubMed] • Drake EJ, Cao J, Qu J, Shah MB, Straubinger
RM, Gulick AM. The 1.8 angstrom crystal structure of PA2412, an
MbtH-like protein from the pyoverdine cluster of Pseudomonas aeruginosa. J
Biol Chem. 2007Jul 13;282 (28):20425-34. [PubMed] • Ghosh D, Griswold JB, Bevilacqua T, Gonzalez-Fernandez F. Purification of the full-length Xenopus interphotoreceptor retinoid binding protein and growth of diffraction-quality crystals. Mol Vis. 2007 Dec 13;13:2275-81. [PubMed] • Gonzalez-Fernandez F, Baer CA , Ghosh D. Module structure of interphotoreceptor retinoid-binding protein (IRBP) may provide bases for its complex role in the visual cycle - structure / function study of Xenopus IRBP. BMC Biochem. 2007 Aug 4;8(1):15 [PubMed] • Juers DH, Lovelace J, Bellamy HD, Snell EH, Matthews BW, Borgstahl GE. Changes to crystals of Escherichia coli beta-galactosidase during room-temperature/low-temperature cycling and their relation to cryo-annealing. Acta Crystallogr D Biol Crystallogr. 2007 Nov;63(Pt 11):1139-53. [PubMed] • Luft JR, Wolfley JR, Said MI, Nagel RM, Lauricella AM, Smith JL, Thayer MH, Veatch CK, Snell EH, Malkowski MG, Detitta GT. Efficient optimization of crystallization conditions by manipulation of drop volume ratio and temperature. Protein Sci. 2007 Apr;16(4):715-22. [PubMed] • Malkowski MG, Quartley E, Friedman AE, Babulski J, Kon Y, Wolfley J, Said M, Luft JR, Phizicky EM, DeTitta GT, Grayhack EJ. Blocking S-adenosylmethionine synthesis in yeast allows selenomethionine incorporation and multiwavelength anomalous dispersion phasing. Proc Natl Acad Sci U S A. 2007 Apr 17;104(16):6678-83. [PubMed] • Mao Q, Duax WL, Umland TC. Crystallization and X-ray diffraction analysis of the beta-ketoacyl-acyl carrier protein reductase FabG from Aquifex aeolicus VF5. Acta Crystallograph Sect F Struct Biol Cryst Commun. 2007 Feb 1;63(Pt 2):106-9. [PubMed] • Miller R, Shah N, Green ML, Furey W, Weeks CM. Shake-and-Bake on the grid. J. Appl. Cryst. 2007 Oct;40(Pt 5):938-44. [URL link] • Olczak A, Glowka ML, Szczesio M, Bojarska J, Duax WL, Burkhart BM, Wawrzak Z. Nonstoichiometric complex of gramicidin D with KI at 0.80 A resolution. Acta Crystallogr D Biol Crystallogr. 2007 Mar;63(Pt 3):319-27. [PubMed] • Pletnev V, Huether R, Habegger L, Schultz W,
Duax W. Rational proteomics of PKD1. I. Modeling the three
dimensional structure and ligand specificity of the C_lectin binding
domain of Polycystin-1. J Mol Model. 2007 Aug;13(8):891-896. • Pletneva N, Pletnev V, Tikhonova T, Pakhomov A, Popov V, Martynov V, Wlodawer A, Dauter Z, Pletnev S., Refined crystal structures of red and green fluorescent proteins from button polyp Zoanthus. Acta Crystallogr D Biol Crystallogr. 2007 Oct;63(Pt 10):1082-1093. [URL link] • Pletneva NV, Pletnev SV, Chudakov DM, Tikhonova TV, Popov VO, Martynov VI, Wlodawer A, Dauter Z, Pletnev VZ. Three-dimensional structure of yellow fluorescent protein zYFP538 from Zoanthus sp. at the resolution 1.8 angstrom. Bioorg Khim. 2007 Jul-Aug;33(4):421-30. [PubMed] • Reger AS, Carney JM, Gulick AM. Biochemical and Crystallographic Analysis of Substrate Binding and Conformational Changes in Acetyl-CoA Synthetase. Biochemistry. 2007 June 5;46(22):6536-46. [PubMed] • Smith AB, Xu H, Sahinidis NV. An integer minimal principle and triplet sieve method for phasing centrosymmetric structures. Acta Cryst. A, 2007 Mar;63(Pt 2):164-71. [URL link] • Snell EH, Bellamy HD, Rosenbaum G, van der Woerd MJ. Non-invasive measurement of X-ray beam heating on a surrogate crystal sample. J Synchrotron Radiat. 2007 Jan;14(Pt 1):109-15. [PubMed] • Thomas JL, Huether R, Mack VL, Scaccia LA, Stoner RC, Duax WL. Structure/function of human type 1 3beta-hydroxysteroid dehydrogenase: An intrasubunit disulfide bond in the Rossmann-fold domain and a Cys residue in the active site are critical for substrate and coenzyme utilization. J Steroid Biochem Mol Biol. 2007 Oct;107(1-2):80-7. [PubMed] • Weeks CM, Furey W. Application of direct methods to macromolecular structure solution. In Macromolecular Crystallography: Conventional and High-Throughput Methods – A Practical Approach, edited by M. Sanderson & J. Skelly. Oxford: Oxford University Press, pp.129-141 (2007). [description] • Wu R, Reger AS, Cao J, Gulick AM, Dunaway-Mariano D. Rational redesign of the 4-chlorobenzoate binding site of 4-chlorobenzoate: coenzyme a ligase for expanded substrate range. Biochemistry. 2007 Dec 18;46(50):14487-99. [PubMed] |
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