2005
• Chaudhuri BN, Yeates TO. A computational method to predict genetically encoded rare amino acids in proteins. Genome Biol. 2005;6(9):R79.
• Cody, V., Luft, J.R. & Pangborn, W. (2005). Understanding the role of Leu22 variants in methotrexate resistance: Comparison of wild-type and Leu22Arg variant mouse and human dihydrofolate reductase ternary crystal complexes with methotrexate and NADPH, Acta Cryst. D61, 147-155.
• Cody, V., Chisum, K., Pope, C. & Queener, S.F. (2005). Purification and characterization of human-derived Pneumocystis jirovecii dihydrofolate reductase expressed in Sf21 insect cells and in Escherichia coli, Protein Purification and Expression, 40, 417-423.
• Cody, V. (2005). Thyroid Hormone Structure-Function Relationships. In Werner and Ingbar's The Thyroid: A Fundamental and Clinical Text, 9th edition, Braverman, L. E. & Utiger, R. D. (eds), Lippincott Williams & Wilkins Publishers, Philadelphia, pp. 151-157.
• Davis, P.J., Davis, F.B. & Cody, V. (2005). Membrane receptors mediating thyroid hormone action, Trends in Endocrin. Metabol. 16, 429-435.
• Dollins DE, Immormino RM, Gewirth DT. Structure of unliganded GRP94, the endoplasmic reticulum Hsp90. Basis for nucleotide-induced conformational change. J Biol Chem. 2005 Aug 26;280(34):30438-47.
• Duax WL, Thomas J, Pletnev V, Addlagatta A, Huether R, Habegger L, Weeks CM. Determining structure and function of steroid dehydrogenase enzymes by sequence analysis, homology modeling, and rational mutational analysis. Ann N Y Acad Sci. 2005 Dec;1061:135-48.
• Duax WL, Huether R, Pletnev VZ, Langs D, Addlagatta A, Connare S, Habegger L, Gill J. Rational genomics I: antisense open reading frames and codon bias in short-chain oxido reductase enzymes and the evolution of the genetic code. Proteins. 2005 Dec 1;61(4):900-6.
• Ghosh, D. Three-dimensional structures of sulfatases. Methods in Enzymology 400, 273-293 (2005)
• Hauptman, H.A., Langs, D.A. & Xu, H. (2005). The phase problem in neutron crystallography. In Hydrogen and Hydration-Sensitive Structural Biology, pp. 187-194, KubaPro Co. Ltd., Tokyo, Japan.
• Judge, R.A., Snell, E.H. & van der Woerd, M.J. (2005). Extracting trends from two decades of microgravity macromolecular crystallization history, Acta Cryst. D61, 763-771.
• Lakhman S. S., Ghosh, D., Blanco, J. G. Functional significance of a natural allelic variance of human carbonyl reductase 3 (CBR3). Drug Metab. Dispos. 33, 254-257 (2005).
• Langs, D.A., Hauptman, H.A. & Xu, H. (2005). Future prospects for the phase determination of macromolecular structures from neutron data alone. In Hydrogen and Hydration-Sensitive Structural Biology, pp. 207-212, KubaPro Co. Ltd., Tokyo, Japan.
• Neumann, P., Cody, V. & Wojtczak, A. (2005). Ligand binding at the transthyretin dimer-dimer interface: structure of transthyretin-T4Ac complex at 2.2Å resolution, Acta Cryst. D61, 1313-1319.
• Pletnev, V. & Duax, W. L. (2005). Rational proteomics IV. Modeling the primary function of the mammalian 17β-hydroxysteroid dehydrogenase type 8, J. Steroid Biochemistry & Molecular Biology, 94, 327-335
• Smith, G,D., Pangborn, W.A. & Blessing, R.H. (2005). The structure of T6 bovine insulin, Acta Cryst., D61, 1476-1482.
• Snell, E.H. & Helliwell, J.R. (2005). Macromolecular crystallization in microgravity, Reports on Progress in Physics, 68, 799-853.
• Snell, E.H., van der Woerd, M.J., Miller, M.D. & Deacon, A.M. (2005). Finding a cold needle in a warm haystack: Infrared imaging applied to locating cryocooled crystals in loops, J. Appl. Cryst. 38, 69-77.
• Schnick C, Robien MA, Brzozowski AM, Dodson EJ, Murshudov GN, Anderson L, Luft JR, Mehlin C, Hol WG, Brannigan JA, Wilkinson AJ. Structures of Plasmodium falciparum purine nucleoside phosphorylase complexed with sulfate and its natural substrate inosine. Acta Crystallogr D Biol Crystallogr. 2005 Sep;61(Pt 9):1245-54.
• Thomas, J.L., Boswell, E.L., Scaccia, L.A., Pletnev, V. & Umland, T.C. (2005). Identification of key amino acids responsible for the substantially higher affinities of human type 1 3β-hydroxysteriod dehydrogenase/isomerase (3β-HSD1) for substrates, coenzymes and inhibitors relative to human 3β-HSD2, J. Biol. Chem. 280, 21321-21328.
• Wang, Y.Z., Feng, L., Said, M., Balderman, S., Liu, Y., Ghosh, D. & Gulick, A. M. (2005). Analysis of the 2.0Å crystal structure of the protein-DNA complex of the human PDEF Ets domain bound to the prostate specific antigen regulatory site. Biochemistry 44, 7095-7106.
• Xu, H., Hauptman, H.A. & Langs, D.A. (2005). Novel statistical approach to the phase problem in neutron crystallography. In Hydrogen and Hydration-Sensitive Structural Biology, pp. 197-205, KubaPro Co. Ltd., Tokyo, Japan.
• Xu, H., Weeks, C. M. & Hauptman, H. A. (2005). Optimizing statistical Shake-and-Bake for Se-atom substructure determination, Acta Cryst. D61, 976-981.