Structure of Bacteriophage T7 Rna Polymerase at 2.6 Å Resolution and a New Low-Salt Crystal Form. B.-C. Wang1, Z.-J. Liu1, C.-J. Chen1,2, K. Chandrasekhar1, W.-R. Chang1, T.-G. Huang1, Z.-L. Wan1, M.-Y. Liu1, R. Sousa3, and J. P. Rose1, 1Department of Biochemistry and Molecular Biology, University of Georgia, Athens, GA 30602, 2Department of Crystallography, University of Pittsburgh, Pittsburgh, PA 15260, and 3Department of Biochemistry, University of Texas Health Science Center, San Antonio, TX 78284
The resolution of a high-salt crystal structure of bacteriophage T7 RNA polymerase (T7 RNAP) has now been extended from 3.3 Å (Sousa et al, Nature, 364, 593-599, 1993) to 2.6 Å using data collected at -186 deg.C. The high-salt crystal form belongs to space group P21 with cell dimensions (low temperature) a = 112.6 Å, b = 137.8 Å, c = 122.7 Å, and b = 96.6deg.. There are 3 molecules (882 residues each) per asymmetric unit related to each other by a local 31 symmetry. The phase extension process included re-refinement of heavy atom sites, density modification, and 6-fold density averaging between the room-temperature and the low-temperature crystals using 'DM'. The new map confirmed the folding observed from the original 3.3Å map for the C-terminal and the central regions, and resolved the ambiguity in the N-terminal region of the molecule. The current model (3 molecules) contains 2,280 residues (86% complete). Other residues may be disordered. Unrefined Ca-coordinates have been deposited in the Protein Data Bank (entry 3RNP). Structural refinement is in progress.
A low-salt crystal form of T7 RNAP has been obtained (grown by C.-J.C). These crystals belong to space group P3121, have one molecule per asymmetric unit, and diffract to at least 3.0 Å resolution using a rotation anode. The crystal structure has been determined by molecular replacement using the high-salt structure as a search model. A preliminary comparison shows that the two structures are very similar in these two crystal forms. In addition, the molecular packing along the local 31 symmetry in the P21 crystals is preserved in the P3121 crystals, running along the crystallographic 31 axis.
Work supported by NIH Grant RO1 GM41936 and the University of Georgia Research Foundation.